Strain sc|0035494

StrainInfo: SI-ID 44729 ^T

Taxon

Clostridium pasteurianum

Cultures (18)

LMG 3285 = ATCC 6013 = CECT 377 = DSM 525 = LMG 5709 = NCIB 9486 = VKM B-1774 = CCUG 31328 = JCM 1408 = CCRC 10942 = KCTC 1674 = NCIMB 9486 = NCDO1845 = NCFB 1845 = IMET 11346 = CCT 0203 = BCRC 10942 = JCM 1108

Other Designations (17)

FIRDI 942 = McCoy 5 = Winogradsky W-5 = IMG 1584b = McClung 2300 = DSMZ 525 = LMAU C85 = McClung L.S., 2300 = W-5 = LMG3285T QC 6/05 = IZ 563 = E. McCoy 5 = L.S. McClung 2300 = McCoy E. 5 = McClung 2000 = NCTC 11833 = NCIB 10671

Sequences (25)

• Gene Nucleotide:U09982
  Clostridium pasteurianum ATCC 6013 Spo0A (spo0A) gene, complete cds
• Gene Nucleotide:AF064035
  Clostridium pasteurianum pyruvate-ferredoxin oxidoreductase 1 (pfo1) gene, partial cds
• Gene Nucleotide:AF064550
  Clostridium pasteurianum putative pyruvate-ferredoxin oxidoreductase (pfo2) gene, partial cds; Cotf (cotf) gene, complete cds; and unknown gene
• Gene Nucleotide:AJ880322
  Clostridium pasteurianum partial gapN gene for NADP-dependent non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase
• Gene Nucleotide:Z19005
  C.pasteurianum gene for ferredoxin
• Gene Nucleotide:AY691220
  Clostridium pasteurianum strain ATCC 6013 60 kDa chaperonin (cpn60) gene, partial cds
• Genome Assembly:GCA_000807255
  Clostridium pasteurianum DSM 525 = ATCC 6013
• Genome Assembly:GCA_001856645
  Clostridium pasteurianum DSM 525 = ATCC 6013
• Genome Assembly:GCA_000807175
  Clostridium pasteurianum DSM 525 = ATCC 6013
• Genome Assembly:GCA_000724205
  Clostridium pasteurianum DSM 525 = ATCC 6013
• Genome Assembly:GCA_000330945
  Clostridium pasteurianum DSM 525 = ATCC 6013
• rRNA Operon Nucleotide:FR870440
  Clostridium pasteurianum partial 16S rRNA gene, type strain CECT 377T
• Gene Nucleotide:JF720831
  Clostridium pasteurianum strain DSM525 FeFe-hydrogenase groupA4 (hydA) gene, partial cds
• rRNA Operon Nucleotide:S51966
  {16S/23S ribosomal DNA spacer region} [Clostridium pasteurianum, DSM 525, Genomic, 275 nt]
• Gene Nucleotide:DQ911316
  Clostridium pasteurianum strain DSM 525 triosephosphate isomerase (tpi) gene, partial cds
• Gene Nucleotide:AF051373
  Clostridium pasteurianum glycerol dehydratase large subunit (dhaB), glycerol dehydratase medium subunit (dhaC), and glycerol dehydratase small subunit (dhaE) genes, complete cds; and unknown gene
• rRNA Operon Nucleotide:DQ911268
  Clostridium pasteurianum strain DSM 525 16S ribosomal RNA gene, partial sequence
• Gene Nucleotide:AF006034
  Clostridium pasteurianum DSM 525 = ATCC 6013 1,3-propanediol dehydrogenase (dhaT) gene, complete cds; and unknown genes
• Gene Nucleotide:JF720830
  Clostridium pasteurianum strain DSM525 FeFe-hydrogenase (hydA) gene, partial cds
• Gene Nucleotide:Y17726
  Clostridium pasteurianum gene encoding putative pyruvate ferredoxin oxidoreductase (4536 bp)
• Gene Nucleotide:HQ433356
  Clostridium pasteurianum strain DSM 525 recombinase A (recA) gene, partial cds
• Gene Nucleotide:Y17727
  Clostridium pasteurianum genes encoding putative pyruvate ferredoxin oxidoreductase (8005 bp)
• Gene Nucleotide:HQ433359
  Clostridium pasteurianum strain DSM 525 DNA gyrase subunit A (gyrA) gene, partial cds
• Gene Nucleotide:JF720832
  Clostridium pasteurianum strain DSM525 FeFe-hydrogenase groupB2 (hyd) gene, partial cds
• rRNA Operon Nucleotide:AB536773
  Clostridium pasteurianum gene for 16S ribosomal RNA, partial sequence, strain: JCM 1408

Associated Publications (22)

• DOI: 10.1099/00221287-134-12-3151
  Richards DF, Linnett PE, Oultram JD, Young M (1988). Restriction endonucleases in Clostridium pasteurianum ATCC 6013 and C. thermohydrosulfuricum DSM 568.
• DOI: 10.1016/0167-4781(93)90096-v
  Zinoni F, Robson RM, Robson RL (1993). Organization of potential alternative nitrogenase genes from Clostridium pasteurianum.
• DOI: 10.1128/jb.155.1.432-434.1983
  Minton NP, Morris JG (1983). Regeneration of protoplasts of Clostridium pasteurianum ATCC 6013.
• DOI: 10.1002/jobm.200410490
  Chien CC (2005). Arylsulfonates as sole source of sulfur for Clostridium pasteurianum DSM 12136.
• DOI: 10.1007/s00253-011-3766-5
  Venkataramanan KP, Boatman JJ, Kurniawan Y, Taconi KA, Bothun GD, Scholz C (2011). Impact of impurities in biodiesel-derived crude glycerol on the fermentation by Clostridium pasteurianum ATCC 6013.
• DOI: 10.1128/genomeA.00232-12
  Rappert S, Song L, Sabra W, Wang W, Zeng AP (2013). Draft Genome Sequence of Type Strain Clostridium pasteurianum DSM 525 (ATCC 6013), a Promising Producer of Chemicals and Fuels.
• DOI: 10.1186/1754-6834-6-50
  Pyne ME, Moo-Young M, Chung DA, Chou CP (2013). Development of an electrotransformation protocol for genetic manipulation of Clostridium pasteurianum.
• DOI: 10.1016/j.jbiotec.2014.03.017
  Venkataramanan KP, Kurniawan Y, Boatman JJ, Haynes CH, Taconi KA, Martin L, Bothun GD, Scholz C (2014). Homeoviscous response of Clostridium pasteurianum to butanol toxicity during glycerol fermentation.
• DOI: 10.1128/genomeA.00790-14
  Pyne ME, Utturkar S, Brown SD, Moo-Young M, Chung DA, Chou CP (2014). Improved Draft Genome Sequence of Clostridium pasteurianum Strain ATCC 6013 (DSM 525) Using a Hybrid Next-Generation Sequencing Approach.
• DOI: 10.1128/genomeA.01596-14
  Rotta C, Poehlein A, Schwarz K, McClure P, Daniel R, Minton NP (2015). Closed Genome Sequence of Clostridium pasteurianum ATCC 6013.
• DOI: 10.1186/s13068-015-0408-7
  Sandoval NR, Venkataramanan KP, Groth TS, Papoutsakis ET (2015). Whole-genome sequence of an evolved Clostridium pasteurianum strain reveals Spo0A deficiency responsible for increased butanol production and superior growth.
• DOI: 10.1128/AEM.02128-16
  Bruder MR, Pyne ME, Moo-Young M, Chung DA, Chou CP (2016). Extending CRISPR-Cas9 Technology from Genome Editing to Transcriptional Engineering in the Genus Clostridium.
• DOI: 10.1016/j.biortech.2011.01.046
  Ahn JH, Sang BI, Um Y (2011). Butanol production from thin stillage using Clostridium pasteurianum.
• DOI: 10.1016/j.biortech.2011.08.094
  Moon C, Lee CH, Sang BI, Um Y (2011). Optimization of medium compositions favoring butanol and 1,3-propanediol production from glycerol by Clostridium pasteurianum.
• DOI: 10.1038/srep06961
  Choi O, Kim T, Woo HM, Um Y (2014). Electricity-driven metabolic shift through direct electron uptake by electroactive heterotroph Clostridium pasteurianum.
• DOI: 10.1128/genomeA.01591-14
  Poehlein A, Grosse-Honebrink A, Zhang Y, Minton NP, Daniel R (2015). Complete Genome Sequence of the Nitrogen-Fixing and Solvent-Producing Clostridium pasteurianum DSM 525.
• DOI: 10.1016/j.jbiotec.2015.10.008
  Gallazzi A, Branska B, Marinelli F, Patakova P (2015). Continuous production of n-butanol by Clostridium pasteurianum DSM 525 using suspended and surface-immobilized cells.
• DOI: 10.1016/j.biortech.2016.02.062
  Sarchami T, Johnson E, Rehmann L (2016). Optimization of fermentation condition favoring butanol production from glycerol by Clostridium pasteurianum DSM 525.
• DOI: 10.1016/j.nbt.2016.03.002
  Gallardo R, Alves M, Rodrigues LR (2016). Influence of nutritional and operational parameters on the production of butanol or 1,3-propanediol from glycerol by a mutant Clostridium pasteurianum.
• DOI: 10.1099/ijsem.0.003523
  Huang Y, Wei Z, Cong L, Qiu Z, Chen R, Deng Y, Zhang Y, Fan H, Ma S (2019). Clostridium prolinivorans sp. nov., a thermophilic bacterium isolated from an anaerobic reactor degrading propionate.
• DOI: 10.1021/acsomega.9b00879
  Sarchami T, Rehmann L (2019). Increased Butanol Yields through Cosubstrate Fermentation of Jerusalem Artichoke Tubers and Crude Glycerol by Clostridium pasteurianum DSM 525.
• DOI: 10.1002/elsc.201700198
  Utesch T, Zeng AP (2018). A novel All-in-One electrolysis electrode and bioreactor enable better study of electrochemical effects and electricity-aided bioprocesses.

Outside links and data sources

• StrainInfo DOI: 10.60712/SI-ID44729.3

Retrieved 5 months ago via StrainInfo API (CC BY 4.0)

Metadata

Cannonical URL

https://seqco.de/s:35494

Local history

• Registered 11 months ago
• Last modified 5 months ago