General Medicine


Publications
576

Comparative genomics of Synechococcus and proposal of the new genus Parasynechococcus

Citation
Coutinho et al. (2016). PeerJ 4
Names
“Parasynechococcus”
Abstract
Synechococcusis among the most important contributors to global primary productivity. The genomes of several strains of this taxon have been previously sequenced in an effort to understand the physiology and ecology of these highly diverse microorganisms. Here we present a comparative study ofSynechococcusgenomes. For that end, we developed GenTaxo, a program written in Perl to perform genomic taxonomy based on average nucleotide identity, average amino acid identity and dinucleotide signatures,

Bordetella bronchialis sp. nov., Bordetella flabilis sp. nov. and Bordetella sputigena sp. nov., isolated from human respiratory specimens, and reclassification of Achromobacter sediminum Zhang et al. 2014 as Verticia sediminum gen. nov., comb. nov

Citation
Vandamme et al. (2015). International Journal of Systematic and Evolutionary Microbiology 65 (Pt_10)
Names
“Pseudobordetella bronchialis” “Pseudobordetella flabilis”
Abstract
The phenotypic and genotypic characteristics of four Bordetella hinzii-like strains from human respiratory specimens and representing nrdA gene sequence based genogroups 3, 14 and 15 were examined. In a 16S rRNA gene sequence based phylogenetic tree, the four strains consistently formed a single coherent lineage but their assignment to the genus Bordetella was equivocal. The respiratory quinone, polar lipid and fatty acid profiles generally conformed to those of species of the genus Bordetella a