Genome sc|0001005

Genomics

Accession

NCBI Assembly:GCA_032594115.1

Type

Isolate Genome

Estimated Quality Metrics

• Completeness: 100.0%
• Contamination: 0.0%
• Quality: 100.0

Ribosomal and transfer RNA genes

• 3 16S rRNAs (up to 100.0%)
• 3 23S rRNAs (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

143.0 ×

Source

• BioSample: SAMN34026938

Other features

• G+C Content: 42.9%
• Coding Density: 81.74%
• Codon Table: 11
• N50: 1,969,708 bp
• Contigs: 1
• Largest Contig: 1,969,708 bp
• Assembly Length: 1,969,708 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

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Last modified about 1 month ago

Sample Metadata

BioSample entries

• BioSample: SAMN34026938

Date

Collection Date: 2011-10-01

Location

Lat Lon: 51.02836 N 13.47125 E

Toponym

Geo Loc Name: Germany

Environment

Env Broad Scale: terrestrial

Env Local Scale: digestive tract

Env Medium: gut content

Other

Host: Atopochetus caudulanus

Rel To Oxygen: anaerobe

Package

Ncbi Submission Package: MIGS.ba.host-associated.6.0

Biosamplemodel: MIGS/MIMS/MIMARKS.host-associated

All retrieved samples

• SAMN34026938: MIGS Cultured Bacterial/Archaeal sample from Methanosarcinaceae archaeon Ac7

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Metadata retrieved about 1 month ago