Methanolapillus africanus

Citation

Formal styling

Methanolapillus africanus Protasov et al., 2023 (valid 2024)

Effective publication

Protasov et al., 2023

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:hfttq0ec (validated)

Canonical URL

https://seqco.de/i:32602

Nomenclature

Rank

Species

Syllabication

a.fri.ca'nus

Etymology

L. masc. adj. africanus, pertaining to Africa

Nomenclatural type

NCBI Assembly: GCA_032714475.1

Reference strain

DSM 115569 = JCM 39381

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

Irregular cocci cells, 1–2 µm in diameter, non-motile. Use methanol and methylamines as methanogenesis substrates together with hydrogen. Requires acetate, yeast extract, Casamino acids, and coenzyme M. The optimum temperature is 37 °C. The G+C content of the type genome is 44.4%, and the estimated genome size is 2.10 Mbp. 

Classification

Archaea » Methanobacteriota » “Methanomicrobia” » Methanosarcinales » Methanosarcinaceae » Methanolapillus » Methanolapillus africanus

Parent

Methanolapillus ncbi

Genomics

Accession

NCBI Assembly:GCA_032714475.1

Type

Isolate Genome

Estimated Quality Metrics

• Completeness: 94.1%
• Contamination: 0.7%
• Quality: 90.6

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 75.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

115.0 ×

Source

• BioSample: SAMN34026939

Other features

• G+C Content: 44.4%
• Coding Density: 78.74%
• Codon Table: 11
• N50: 124,322 bp
• Contigs: 34
• Largest Contig: 367,644 bp
• Assembly Length: 2,103,793 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

See additional details

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Last modified about 1 month ago

Metadata

Outside links and data sources

• NCBI Taxonomy: 3028297
• GTDB Genome: GCA_032714475.1
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Methanolapillus africanus (see reference source)

Search sequences

• Seach in NCBI Nucleotide
• NCBI Genomes table

Local history

• This name was last modified 6 months ago
• Submission process status
• Quality checks before valid publication

Registered by

Protasov, Evgenii over 1 year ago

Submitted by

Protasov, Evgenii 8 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Validated by

Rodriguez-R, Luis M 7 months ago

Date of priority

2024-04-16 06:48 PM (UTC)