Genome sc|0000102


Database

NCBI Assembly

Accession

GCA_947077715.1

Genomics

Accession
NCBI Assembly:GCA_947077715.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 98.0%
  • Contamination: 2.9%
  • Quality: 83.5
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
56.0 ×
Source
Other features
  • G+C Content: 65.53%
  • Coding Density: 85.43%
  • Codon Table: 11
  • N50: 20,253 bp
  • Contigs: 225
  • Largest Contig: 60,535 bp
  • Assembly Length: 3,090,338 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Script HMM.essential.rb from the Enveomics scripts collection using default paramentes was used for assess the completness and contamination of the MAG.
Automated checks
Complete

Last modified 20 days ago

Sample Metadata

BioSample entries
Date
Not detected
Location
Not detected
Toponym
Not detected
Environment
Not detected
Other
Not detected
Package
Ena Checklist: ERC000011
All retrieved samples

Metadata retrieved 20 days ago

Sequencing Experiments

NextSeq 500 paired end sequencing


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