Genome sc|0000106


Database

NCBI Assembly

Accession

GCA_002344825.1

Genomics

Accession
NCBI Assembly:GCA_002344825.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 94.01%
  • Contamination: 0.07%
  • Quality: 93.66
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 59.0%)
  • 0 23S rRNAs
  • tRNAs for 21 amino acids
Sequencing depth
35.6 ×
Source
Other features
  • G+C Content: 46.35%
  • Coding Density: 93.26%
  • Codon Table: 11
  • N50: 43,264 bp
  • Contigs: 81
  • Largest Contig: 136,725 bp
  • Assembly Length: 2,182,484 bp
  • Ambiguous Assembly Fraction: 0.46%
Submitter comments
Completeness and contamination estimated with CheckM v. 2.
Automated checks
Complete

Sample Metadata

Date
Collection Date: not applicable • 2011-12-16
Location
Lat Lon: 27.485973 S 153.190699 E
Toponym
Geo Loc Name: Australia: Brisbane, Thorneside Wastewater Treatment Plant
Environment
Sample Type: metagenomic assembly
Isolation Source: activated sludge
Other
Not detected
Package
Ncbi Submission Package: Microbe.1.0MIMS.me.wastewater.5.0
Biosamplemodel: Microbe, viral or environmental • MIGS/MIMS/MIMARKS.wastewater
All retrieved samples

Metadata retrieved about 2 months ago


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