Multiplicimicrobium inquinatumTs


Citation

Formal styling
Multiplicimicrobium inquinatumTs Seymour et al., 2023 (valid 2024)
Effective publication
Seymour et al., 2023
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:xqyhj6of (validated)
Canonical URL
https://seqco.de/i:23679

Nomenclature

Rank
Species
Syllabication
in.qui.na'tum
Etymology
L. neut. adj. inquinatum, polluted or defiled, referring to the recovery of this organism from wastewater
Nomenclatural type
NCBI Assembly: GCA_002344825.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
This species is the type for the genus Multiplicimicrobium. Estimated genome size for this species is between 2 and 2.25 Mb with a %GC content of 46.35-46.78 %. Very large ORFs or partial homologs to very large ORFs, containing domains associated with cellular adhesion, an ADP/ATP translocase, and genes associated with respiratory complex I, II, IV and V are encoded by genomes of this species. The presence of cytochrome c oxidase in the genome indicates that this species is likely aerobic, and nitric oxide is predicted as an alternative terminal electron acceptor. A reversible acetyl-CoA synthetase is also encoded by genomes of this species, and may be indicative of acetate utilization, or fermentation of sugars to acetate. All genes required for the production of the Type-4a pilus are present in genomes of this species. Assemblies for this species originated from activated sludge bioreactor samples. The nomenclatural type for the species is the genome GCA_002344825.1.
Classification
Bacteria » Omnitrophota » Omnitrophia » Omnitrophales » Aquincolibacteriaceae » Multiplicimicrobium » Multiplicimicrobium inquinatumTs
Parent
Multiplicimicrobium gtdb

Genomics

Accession
NCBI Assembly:GCA_002344825.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 94.01%
  • Contamination: 0.07%
  • Quality: 93.66
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 59.0%)
  • 0 23S rRNAs
  • tRNAs for 21 amino acids
Sequencing depth
35.6 ×
Source
Other features
  • G+C Content: 46.35%
  • Coding Density: 93.26%
  • Codon Table: 11
  • N50: 43,264 bp
  • Contigs: 81
  • Largest Contig: 136,725 bp
  • Assembly Length: 2,182,484 bp
  • Ambiguous Assembly Fraction: 0.46%
Submitter comments
Completeness and contamination estimated with CheckM v. 2.
Automated checks
Complete
See additional details

Last modified about 1 month ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Palmer, Marike about 2 years ago
Submitted by
Palmer, Marike 5 months ago
Curators
Validated by
Rodriguez-R, Luis M 14 days ago
Date of priority
2024-07-12 07:11 PM (UTC)

Publications
1

Citation Title
Seymour et al., 2023, Nature Microbiology Hyperactive nanobacteria with host-dependent traits pervade Omnitrophota
Effective publication



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