JSON

Genome sc|0000117

Name

“Aquivivens invisus”

Database

NCBI Assembly

Accession

GCA_001804415.1

Genomics

Accession
NCBI Assembly:GCA_001804415.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 94.7%
  • Contamination: 0.49%
  • Quality: 92.25
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Source
Other features
  • G+C Content: 63.37%
  • Coding Density: 93.33%
  • Codon Table: 11
  • N50: 48,868 bp
  • Contigs: 46
  • Largest Contig: 96,665 bp
  • Assembly Length: 1,420,395 bp
  • Ambiguous Assembly Fraction: 0.08%
Submitter comments
Completeness and contamination estimates were determined with CheckM v.2.
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2011-08-25
Location
Lat Lon: 39.5369 N 107.7828 W
Toponym
Geo Loc Name: USA: Rifle, CO
Environment
Isolation Source: Rifle well CD01 at time point 1 / A; 5m depth; 0.2 filter
Other
Not detected
Package
Ncbi Submission Package: Metagenome.environmental.1.0
Biosamplemodel: Metagenome or environmental
All retrieved samples
Metadata retrieved 3 months ago


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