Aquivivens invisusTs


Citation

Formal styling
Aquivivens invisusTs Seymour et al., 2023 (valid 2024)
Effective publication
Seymour et al., 2023
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:xqyhj6of (validated)
Canonical URL
https://seqco.de/i:23665

Nomenclature

Rank
Species
Syllabication
in.vi'sus
Etymology
L. masc. adj. invisus, unseen, referring to them being hidden or unseen as they occur in the subsurface
Nomenclatural type
NCBI Assembly: GCA_001804415.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
This species is the nomenclatural type for the genus Aquivivens. Genomes belonging to this species are predicted to range between 1.7 Mb and 2 Mb. %GC content for the species range between 62.83-63.50 %. Genomes of this species encode respiratory complexes I through V, with aerobic respiration being likely due to the presence of cytochrome c oxidase in the genomes. Nitrite is predicted as alternative terminal electron acceptor, while a metal-reducing cytochrome is also encoded by genomes belonging to this species. ADP/ATP translocase, components of the tight-adherence complex, genes for the production of a Type-4a pilus, and at least two very large ORFs are encoded by genomes of this species. Assemblies for this species originated from soil and groundwater samples from Rifle, Colorado, USA, with a pH of 7.28 and oxygen concentrations of 0.29 mM. The nomenclatural type for the species is the genome GCA_001804415.1.
Classification
Bacteria » Omnitrophota » Aquiviventia » Aquiviventales » Aquiviventaceae » Aquivivens » Aquivivens invisusTs
Parent
Aquivivens gtdb

Genomics

Accession
NCBI Assembly:GCA_001804415.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 94.7%
  • Contamination: 0.49%
  • Quality: 92.25
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Source
Other features
  • G+C Content: 63.37%
  • Coding Density: 93.33%
  • Codon Table: 11
  • N50: 48,868 bp
  • Contigs: 46
  • Largest Contig: 96,665 bp
  • Assembly Length: 1,420,395 bp
  • Ambiguous Assembly Fraction: 0.08%
Submitter comments
Completeness and contamination estimates were determined with CheckM v.2.
Automated checks
Complete
See additional details

Last modified about 1 month ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Palmer, Marike about 2 years ago
Submitted by
Palmer, Marike 5 months ago
Curators
Validated by
Rodriguez-R, Luis M 14 days ago
Date of priority
2024-07-12 07:11 PM (UTC)

Publications
1

Citation Title
Seymour et al., 2023, Nature Microbiology Hyperactive nanobacteria with host-dependent traits pervade Omnitrophota
Effective publication



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