JSON

Genome sc|0000123

Name

“Phelpsiimicrobium noxiivivens”

Database

NCBI Assembly

Accession

GCA_001873995.1

Genomics

Accession
NCBI Assembly:GCA_001873995.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 97.27%
  • Contamination: 1.82%
  • Quality: 88.17
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Source
Other features
  • G+C Content: 44.08%
  • Coding Density: 92.99%
  • Codon Table: 11
  • N50: 58,930 bp
  • Contigs: 39
  • Largest Contig: 97,064 bp
  • Assembly Length: 1,559,754 bp
  • Ambiguous Assembly Fraction: 0.011%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2009-11-08
Location
Lat Lon: 38.56 N 110.8 W
Toponym
Geo Loc Name: USA: Crystal Geyser near Green River, Utah
Environment
Isolation Source: groundwater filtered through a a 3.0 um filter and then through a 0.2 um filter
Other
Not detected
Package
Ncbi Submission Package: Metagenome.environmental.1.0
Biosamplemodel: Metagenome or environmental
All retrieved samples
Metadata retrieved 12 days ago


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