JSON

Genome sc|0000135

Name

Pegaeibacterium caenilacustreTs

Database

NCBI Assembly

Accession

GCA_903820505.1

Genomics

Accession
NCBI Assembly:GCA_903820505.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 96.99%
  • Contamination: 0.85%
  • Quality: 92.74
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Source
Other features
  • G+C Content: 54.27%
  • Coding Density: 91.89%
  • Codon Table: 11
  • N50: 72,311 bp
  • Contigs: 68
  • Largest Contig: 197,154 bp
  • Assembly Length: 2,228,086 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Completeness and contamination estimated with CheckM v.2.
Automated checks
Complete
Last modified 2 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2018-08-22
Location
Geographic Location Latitude: 61.20805555555556
Geographic Location Longitude: 25.11388888888889
Toponym
Geographic Location Country And Or Sea: Finland
Environment
Isolation Source: freshwater sediment
Environment Biome: lentic water body
Environment Feature: lake
Other
Geographic Location Depth: 6.5
Package
Ena Checklist: ERC000047 • ERC000024
All retrieved samples
Metadata retrieved 2 months ago


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