Genome sc|0001439


Database

NCBI Assembly

Accession

GCA_033977065.1

Genomics

Accession
NCBI Assembly:GCA_033977065.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 91.73%
  • Contamination: 0.0%
  • Quality: 91.73
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 21 amino acids
Source
Other features
  • G+C Content: 42.0%
  • Coding Density: 91.57%
  • Codon Table: 11
  • N50: 497,235 bp
  • Contigs: 7
  • Largest Contig: 717,144 bp
  • Assembly Length: 1,799,045 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Completeness and contamination were measured with CheckM2.
rRNAs and tRNAs were annotated with Bakta.
Automated checks
Complete

Last modified 10 days ago

Sample Metadata

BioSample entries
Date
Collection Date: 2021 • 2023
Location
Not detected
Toponym
Not detected
Environment
Env Broad Scale: dinoflagellate culture
Other
Host: Cladocopium sp.
Package
Ncbi Submission Package: MIMS.me.host-associated.6.0
Biosamplemodel: MIGS/MIMS/MIMARKS.host-associated
All retrieved samples

Metadata retrieved 10 days ago

Sequencing Experiments

SRR26803926
SRR26803925


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