Genome sc|0001439


Database

NCBI Assembly

Accession

GCA_033977065.1

Genomics

Accession
NCBI Assembly:GCA_033977065.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 91.73%
  • Contamination: 0.0%
  • Quality: 91.73
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 21 amino acids
Source
Other features
  • G+C Content: 42.0%
  • Coding Density: 91.57%
  • Codon Table: 11
  • N50: 497,235 bp
  • Contigs: 7
  • Largest Contig: 717,144 bp
  • Assembly Length: 1,799,045 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Completeness and contamination were measured with CheckM2.
rRNAs and tRNAs were annotated with Bakta.
Automated checks
Complete

Sample Metadata

BioSample entries
Date
Collection Date: 2021 • 2023
Location
Lat Lon: not applicable
Toponym
Geo Loc Name: not applicable
Environment
Env Broad Scale: dinoflagellate culture
Env Local Scale: not applicable
Env Medium: not applicable
Other
Host: Cladocopium sp.
Package
Ncbi Submission Package: MIMS.me.host-associated.6.0
Biosamplemodel: MIGS/MIMS/MIMARKS.host-associated
All retrieved samples

Metadata retrieved about 9 hours ago

Sequencing Experiments



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