Algichlamydia australiensis^Ts

Citation

Formal styling

Algichlamydia australiensis^Ts Maire et al., 2024

Effective publication

Maire et al., 2024

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:xcb93nqb (validated)

Canonical URL

https://seqco.de/i:33257

Nomenclature

Rank

Species

Syllabication

aus.tra.li.en'sis

Etymology

N.L. fem. adj. australiensis, of or belonging to Australia, the country where the host of this bacteria was isolated

Nomenclatural type

NCBI Assembly: GCA_033977065.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

Type genome: Cla49, infecting a laboratory culture of Cladocopium sp. SCF049.01, itself isolated from the coral Pocillopora damicornis from Davies Reef, Australia. 

Classification

Bacteria » Chlamydiota » Chlamydiia » Chlamydiales » Simkaniaceae » Algichlamydia » Algichlamydia australiensis^Ts

Parent

Algichlamydia

Genomics

Accession

NCBI Assembly:GCA_033977065.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 91.73%
• Contamination: 0.0%
• Quality: 91.73

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 21 amino acids

Source

• SRA: SRR26803926
• SRA: SRR26803925

Other features

• G+C Content: 42.0%
• Coding Density: 91.57%
• Codon Table: 11
• N50: 497,235 bp
• Contigs: 7
• Largest Contig: 717,144 bp
• Assembly Length: 1,799,045 bp
• Ambiguous Assembly Fraction: 0.0%

Submitter comments

Completeness and contamination were measured with CheckM2.
rRNAs and tRNAs were annotated with Bakta.

Automated checks

Complete

See additional details

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Last modified 10 days ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_033977065.1
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Algichlamydia australiensis (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 2 months ago
• Submission process status
• Quality checks before valid publication

Registered by

Maire, Justin about 1 year ago

Submitted by

Maire, Justin 12 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Endorsed by

Palmer, Marike 11 months ago

Validated by

Rodriguez-R, Luis M 2 months ago

Date of priority

2024-08-31 07:01 AM (UTC)