Genome sc|0001456


Database

NCBI Assembly

Accession

GCA_017316025.1

Genomics

Accession
NCBI Assembly:GCA_017316025.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 99.1%
  • Contamination: 3.8%
  • Quality: 80.1
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
100.0 ×
Source
Other features
  • G+C Content: 37.37%
  • Coding Density: 86.13%
  • Codon Table: 11
  • N50: 222,350 bp
  • Contigs: 28
  • Largest Contig: 585,224 bp
  • Assembly Length: 2,972,596 bp
  • Ambiguous Assembly Fraction: 0.0039%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2014-08
Location
Not detected
Toponym
Geo Loc Name: USA:Massachusetts
Environment
Sample Type: isolate
Isolation Source: Sand filtrate
Other
Not detected
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
All retrieved samples

Metadata retrieved 5 months ago


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