Enterococcus palustris


Citation

Formal styling
Enterococcus palustris Schwartzman et al., 2024
Effective publication
Schwartzman et al., 2024
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:csh66vwa (validated)
Cannonical URL
https://seqco.de/i:32890

Nomenclature

Rank
Species
Syllabication
pa.lus'tris
Etymology
N.L. masc. adj. palustris, marshy or swampy, to refer to the recovery of this organism from a swampy area
Nomenclatural type
NCBI Assembly: GCA_002141365.1
Reference strain
7F3_DIV0205
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Type strain isolated from dragonfly inhabiting a swampy area
Classification
Bacteria » Bacillota » Bacilli » Lactobacillales » Enterococcaceae » Enterococcus » Enterococcus palustris
Parent
Enterococcus gtdb

Genomics

Accession
NCBI Assembly:GCA_002141365.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 3.8%
  • Quality: 81.0
Ribosomal and transfer RNA genes
  • 6 16S rRNAs (up to 100.0%)
  • 6 23S rRNAs (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
88.0 ×
Source
Other features
  • G+C Content: 35.68%
  • Coding Density: 86.65%
  • Codon Table: 11
  • N50: 2,352,503 bp
  • Contigs: 4
  • Largest Contig: 2,352,503 bp
  • Assembly Length: 3,822,405 bp
  • Ambiguous Assembly Fraction: 1.14%
Automated checks
Complete
See additional details

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Manson, Abigail 8 months ago
Submitted by
Manson, Abigail 7 months ago
Curators
Endorsed by
Palmer, Marike 5 months ago
Validated by
Palmer, Marike 4 months ago
Date of priority
2024-03-01 12:37 AM (UTC)

Publications
1

Citation Title
Schwartzman et al., 2024, Proceedings of the National Academy of Sciences Global diversity of enterococci and description of 18 previously unknown species
Effective publication



© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license