Enterococcus palustris

Citation

Formal styling

Enterococcus palustris Schwartzman et al., 2024

Effective publication

Schwartzman et al., 2024

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:csh66vwa (validated)

Canonical URL

https://seqco.de/i:32890

Nomenclature

Rank

Species

Syllabication

pa.lus'tris

Etymology

N.L. masc. adj. palustris, marshy or swampy, to refer to the recovery of this organism from a swampy area

Nomenclatural type

NCBI Assembly: GCA_002141365.1

Reference strain

7F3_DIV0205

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

Type strain isolated from dragonfly inhabiting a swampy area

Classification

Bacteria » Bacillota » Bacilli » Lactobacillales » Enterococcaceae » Enterococcus » Enterococcus palustris

Parent

Enterococcus gtdb

Genomics

Accession

NCBI Assembly:GCA_002141365.1

Type

Isolate Genome

Estimated Quality Metrics

• Completeness: 100.0%
• Contamination: 3.8%
• Quality: 81.0

Ribosomal and transfer RNA genes

• 6 16S rRNAs (up to 100.0%)
• 6 23S rRNAs (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

88.0 ×

Source

• BioSample: SAMN04634020

Other features

• G+C Content: 35.68%
• Coding Density: 86.65%
• Codon Table: 11
• N50: 2,352,503 bp
• Contigs: 4
• Largest Contig: 2,352,503 bp
• Assembly Length: 3,822,405 bp
• Ambiguous Assembly Fraction: 1.14%

Automated checks

Complete

See additional details

Metadata

Outside links and data sources

• GTDB Genome: GCA_002141365.1
• GTDB Tree: s__Enterococcus palustris
• Wikispecies: Enterococcus palustris (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 8 months ago
• Submission process status
• Quality checks before valid publication

Registered by

Manson, Abigail about 1 year ago

Submitted by

Manson, Abigail 11 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Endorsed by

Palmer, Marike 9 months ago

Validated by

Palmer, Marike 8 months ago

Date of priority

2024-03-01 12:37 AM (UTC)