Genome sc|0001457


Database

NCBI Assembly

Accession

GCA_017377575.1

Genomics

Accession
NCBI Assembly:GCA_017377575.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 99.1%
  • Contamination: 8.5%
  • Quality: 56.6
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 18 amino acids
Sequencing depth
100.0 ×
Source
Other features
  • G+C Content: 42.22%
  • Coding Density: 87.2%
  • Codon Table: 11
  • N50: 160,418 bp
  • Contigs: 59
  • Largest Contig: 448,607 bp
  • Assembly Length: 4,546,297 bp
  • Ambiguous Assembly Fraction: 0.0088%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2014-12
Location
Not detected
Toponym
Geo Loc Name: USA:Massachusetts
Environment
Sample Type: isolate
Isolation Source: cloacal & blood material from turtle
Other
Host: Kemp's ridley turtle
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
All retrieved samples

Metadata retrieved 5 months ago


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