Enterococcus mansonii

Citation

Formal styling

Enterococcus mansonii Schwartzman et al., 2024

Effective publication

Schwartzman et al., 2024

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:csh66vwa (validated)

Canonical URL

https://seqco.de/i:32885

Nomenclature

Rank

Species

Syllabication

man.so'ni.i

Etymology

N.L. gen. n. mansonii, of Manson, named for Joseph R. Manson who contributed greatly to sampling efforts

Nomenclatural type

NCBI Assembly: GCA_002140715.1

Reference strain

4G2_DIV0659

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

Type strain isolated from turkey feces 

Classification

Bacteria » Bacillota » Bacilli » Lactobacillales » Enterococcaceae » Enterococcus » Enterococcus mansonii

Parent

Enterococcus gtdb

Genomics

Accession

NCBI Assembly:GCA_002140715.1

Type

Isolate Genome

Estimated Quality Metrics

• Completeness: 100.0%
• Contamination: 3.8%
• Quality: 81.0

Ribosomal and transfer RNA genes

• 4 16S rRNAs (up to 100.0%)
• 7 23S rRNAs (up to 73.0%)
• tRNAs for 20 amino acids

Sequencing depth

93.0 ×

Source

• BioSample: SAMN04634079

Other features

• G+C Content: 34.57%
• Coding Density: 85.77%
• Codon Table: 11
• N50: 678,770 bp
• Contigs: 15
• Largest Contig: 1,464,874 bp
• Assembly Length: 3,492,328 bp
• Ambiguous Assembly Fraction: 2.83%

Automated checks

Complete

See additional details

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Last modified 6 days ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_002140715.1
• GTDB Tree: s__Enterococcus mansonii
• Wikispecies: Enterococcus mansonii (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 9 months ago
• Submission process status
• Quality checks before valid publication

Registered by

Manson, Abigail about 1 year ago

Submitted by

Manson, Abigail 11 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Endorsed by

Palmer, Marike 10 months ago

Validated by

Palmer, Marike 9 months ago

Date of priority

2024-03-01 12:37 AM (UTC)