Genome sc|0001462


Database

NCBI Assembly

Accession

GCA_002140175.1

Genomics

Accession
NCBI Assembly:GCA_002140175.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 6.6%
  • Quality: 67.0
Ribosomal and transfer RNA genes
  • 4 16S rRNAs (up to 74.0%)
  • 2 23S rRNAs (up to 29.0%)
  • tRNAs for 20 amino acids
Sequencing depth
91.0 ×
Source
Other features
  • G+C Content: 35.28%
  • Coding Density: 83.04%
  • Codon Table: 11
  • N50: 855,978 bp
  • Contigs: 14
  • Largest Contig: 1,183,706 bp
  • Assembly Length: 3,369,985 bp
  • Ambiguous Assembly Fraction: 4.09%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2015
Location
Not detected
Toponym
Geo Loc Name: Germany
Environment
Isolation Source: feces
Other
Host: Bird
Package
Ncbi Submission Package: Pathogen.cl.1.0
Biosamplemodel: Pathogen.cl
All retrieved samples

Metadata retrieved 5 months ago


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