Genome sc|0001463


Database

NCBI Assembly

Accession

GCA_002141365.1

Genomics

Accession
NCBI Assembly:GCA_002141365.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 3.8%
  • Quality: 81.0
Ribosomal and transfer RNA genes
  • 6 16S rRNAs (up to 100.0%)
  • 6 23S rRNAs (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
88.0 ×
Source
Other features
  • G+C Content: 35.68%
  • Coding Density: 86.65%
  • Codon Table: 11
  • N50: 2,352,503 bp
  • Contigs: 4
  • Largest Contig: 2,352,503 bp
  • Assembly Length: 3,822,405 bp
  • Ambiguous Assembly Fraction: 1.14%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2015
Location
Not detected
Toponym
Geo Loc Name: USA: Illinois, Naperville
Environment
Isolation Source: feces
Other
Host: Pachydiplax longipennis
Package
Ncbi Submission Package: Pathogen.cl.1.0
Biosamplemodel: Pathogen.cl
All retrieved samples

Metadata retrieved 5 months ago


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