JSON

Genome sc|0000157

Name

Cloacimonas acidaminivoransTs

Database

NCBI Assembly

Accession

GCA_000146065.1

Genomics

Accession
NCBI Assembly:GCA_000146065.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 1.1%
  • Quality: 94.5
Ribosomal and transfer RNA genes
  • 2 16S rRNAs (up to 100.0%)
  • 2 23S rRNAs (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
10.9 ×
Source
Other features
  • G+C Content: 37.9%
  • Coding Density: 86.52%
  • Codon Table: 11
  • N50: 2,246,820 bp
  • Contigs: 1
  • Largest Contig: 2,246,820 bp
  • Assembly Length: 2,246,820 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
CheckM1 was used to estimate genome completeness, contamination and the command ssu_finder (checkM1) was used for detection of ssu genes.
Automated checks
Complete
Last modified about 1 month ago

Sample Metadata

BioSample entries
Date
Not detected
Location
Not detected
Toponym
Not detected
Environment
Isolation Source: obtained from Evry mesophilic anaerobic digester (France)
Other
Not detected
Package
Ena Checklist: ERC000011
All retrieved samples
Metadata retrieved about 1 month ago


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