Genome sc|0001608

Genomics

Accession

NCBI Assembly:GCA_037465745.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 92.95%
• Contamination: 2.46%
• Quality: 80.65

Ribosomal and transfer RNA genes

• 0 16S rRNAs
• 0 23S rRNAs
• tRNAs for 14 amino acids

Sequencing depth

92.95 ×

Source

• BioSample: SAMN37643305

Other features

• G+C Content: 37.5%
• Coding Density: 87.48%
• Codon Table: 11
• N50: 23,482 bp
• Contigs: 128
• Largest Contig: 61,525 bp
• Assembly Length: 2,023,970 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

Sample Metadata

BioSample entries

• BioSample: SAMN37643305

Date

Collection Date: 2019-06-05

Location

Lat Lon: 40.4637 N 3.7492 W

Toponym

Geo Loc Name: Spain

Environment

Sample Type: metagenomic assembly

Isolation Source: feces

Other

Host: Homo sapiens

Package

Ncbi Submission Package: MIMAG.6.0

Biosamplemodel: MIMAG

Additional Accessions

SRR5558136

All retrieved samples

• SAMN37643305: MIMAG Metagenome-assembled Genome sample from Ruminococcus sp.

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Metadata retrieved about 7 hours ago