Metadata as EBI XML
<EXPERIMENT_SET>
<EXPERIMENT accession="SRX697332" alias="Meta-A" center_name="Georgia Institute of Technology" broker_name="NCBI">
<IDENTIFIERS>
<PRIMARY_ID>SRX697332</PRIMARY_ID>
<SUBMITTER_ID namespace="Georgia Institute of Technology">Meta-A</SUBMITTER_ID>
</IDENTIFIERS>
<TITLE>Meta-A: Pensacola Beach FL (USA), 16S rRNA</TITLE>
<STUDY_REF accession="SRP046227">
<IDENTIFIERS>
<PRIMARY_ID>SRP046227</PRIMARY_ID>
<EXTERNAL_ID namespace="BioProject">PRJNA260285</EXTERNAL_ID>
</IDENTIFIERS>
</STUDY_REF>
<DESIGN>
<DESIGN_DESCRIPTION>16S rRNA gene amplicon libraries were prepared on both pooled and original samples. Genomic DNA was sequenced at the Argonne National Laboratory using Illumina MiSeq with paired-end strategy and reads of 151bp in length, using custom sequencing primers and procedures as previously described (Caporaso et al., 2012, ISME J 6:1621–1624).</DESIGN_DESCRIPTION>
<SAMPLE_DESCRIPTOR accession="SRS697243">
<IDENTIFIERS>
<PRIMARY_ID>SRS697243</PRIMARY_ID>
<EXTERNAL_ID namespace="BioSample">SAMN03019774</EXTERNAL_ID>
</IDENTIFIERS>
</SAMPLE_DESCRIPTOR>
<LIBRARY_DESCRIPTOR>
<LIBRARY_NAME/>
<LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
<LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
<LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
<LIBRARY_LAYOUT>
<PAIRED NOMINAL_SDEV="0.0E0"/>
</LIBRARY_LAYOUT>
</LIBRARY_DESCRIPTOR>
<SPOT_DESCRIPTOR>
<SPOT_DECODE_SPEC>
<SPOT_LENGTH>302</SPOT_LENGTH>
<READ_SPEC>
<READ_INDEX>0</READ_INDEX>
<READ_CLASS>Application Read</READ_CLASS>
<READ_TYPE>Forward</READ_TYPE>
<BASE_COORD>1</BASE_COORD>
</READ_SPEC>
<READ_SPEC>
<READ_INDEX>1</READ_INDEX>
<READ_CLASS>Application Read</READ_CLASS>
<READ_TYPE>Reverse</READ_TYPE>
<BASE_COORD>152</BASE_COORD>
</READ_SPEC>
</SPOT_DECODE_SPEC>
</SPOT_DESCRIPTOR>
</DESIGN>
<PLATFORM>
<ILLUMINA>
<INSTRUMENT_MODEL>Illumina MiSeq</INSTRUMENT_MODEL>
</ILLUMINA>
</PLATFORM>
<PROCESSING/>
<EXPERIMENT_LINKS>
<EXPERIMENT_LINK>
<XREF_LINK>
<DB>ENA-SAMPLE</DB>
<ID>SRS697243</ID>
</XREF_LINK>
</EXPERIMENT_LINK>
<EXPERIMENT_LINK>
<XREF_LINK>
<DB>ENA-SUBMISSION</DB>
<ID>SRA182713</ID>
</XREF_LINK>
</EXPERIMENT_LINK>
<EXPERIMENT_LINK>
<XREF_LINK>
<DB>ENA-FASTQ-FILES</DB>
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</XREF_LINK>
</EXPERIMENT_LINK>
<EXPERIMENT_LINK>
<XREF_LINK>
<DB>ENA-SUBMITTED-FILES</DB>
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</XREF_LINK>
</EXPERIMENT_LINK>
</EXPERIMENT_LINKS>
</EXPERIMENT>
</EXPERIMENT_SET>
Metadata retrieved about 1 month ago