Genome sc|0001904


Database

NCBI Assembly

Accession

GCA_038144975.1

Genomics

Accession
NCBI Assembly:GCA_038144975.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 98.63%
  • Contamination: 0.0%
  • Quality: 98.63
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Source
Other features
  • G+C Content: 64.5%
  • Coding Density: 89.87%
  • Codon Table: 11
  • N50: 152,102 bp
  • Contigs: 30
  • Largest Contig: 410,793 bp
  • Assembly Length: 2,456,412 bp
  • Ambiguous Assembly Fraction: 0.0077%
Submitter comments
Completeness and contamination were evaluated using CheckM v 1.1.3
Automated checks
Complete

Last modified 4 days ago

Sample Metadata

BioSample entries
Date
Collection Date: 2020-02-26
Location
Lat Lon: 27.505250 S 152.969917 E
Toponym
Geo Loc Name: Australia:Brisbane
Environment
Sample Type: metagenomic assembly
Isolation Source: estuary
Env Broad Scale: estuarine biome
Env Local Scale: estuary • brackish
Env Medium: estuarine water
Other
Depth: 0
Package
Ncbi Submission Package: MIMAG.water.6.0MIMS.me.water.6.0
Biosamplemodel: MIMAG.water • MIGS/MIMS/MIMARKS.water
All retrieved samples

Metadata retrieved 4 days ago

Sequencing Experiments

Brisbane river estuary microbiome


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