Genome sc|0001908


Database

NCBI Assembly

Accession

GCA_038141705.1

Genomics

Accession
NCBI Assembly:GCA_038141705.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 98.78%
  • Contamination: 0.0%
  • Quality: 98.78
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
0.001603664071 ×
Source
Other features
  • G+C Content: 46.0%
  • Coding Density: 90.23%
  • Codon Table: 11
  • N50: 1,680,473 bp
  • Contigs: 6
  • Largest Contig: 1,680,473 bp
  • Assembly Length: 2,134,049 bp
  • Ambiguous Assembly Fraction: 4.7e-05%
Submitter comments
Completeness and contamination were evaluated using CheckM v 1.1.3
Automated checks
Complete

Last modified 8 days ago

Sample Metadata

BioSample entries
Date
Collection Date: 2020-08-31
Location
Lat Lon: 27.445556 S 153.084444 E
Toponym
Geo Loc Name: Australia:Brisbane
Environment
Sample Type: metagenomic assembly
Isolation Source: estuary
Env Broad Scale: estuarine biome
Env Local Scale: estuary • brackish
Env Medium: estuarine water
Other
Depth: 0
Package
Ncbi Submission Package: MIMAG.water.6.0MIMS.me.water.6.0
Biosamplemodel: MIMAG.water • MIGS/MIMS/MIMARKS.water
All retrieved samples

Metadata retrieved 8 days ago

Sequencing Experiments

Brisbane river estuary microbiome


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