JSON

Genome sc|0001927

Name

“Bradyrhizobium robustumense”

Database

NCBI Assembly

Accession

GCA_029990105.1

Genomics

Accession
NCBI Assembly:GCA_029990105.1
Cultures
Strain sc|0038743
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 1.06%
  • Quality: 94.7
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 21 amino acids
Sequencing depth
165.0 ×
Source
Other features
  • G+C Content: 62.5%
  • Coding Density: 85.44%
  • Codon Table: 11
  • N50: 91,003 bp
  • Contigs: 289
  • Largest Contig: 240,991 bp
  • Assembly Length: 9,335,704 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
contamination and completeness checks in checkM2, genome statistics and assembly coverage using QUAST, BBTOOlS,MiGA and checked tRNA elements using NCBI refseq annotation
Automated checks
Complete
Last modified 12 days ago

Sample Metadata

BioSample entries
Date
Not detected
Location
Not detected
Toponym
Not detected
Environment
Not detected
Other
Not detected
Package
Not detected
All retrieved samples
Metadata retrieved about 2 months ago


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