Genome sc|0001927


Database

NCBI Assembly

Accession

GCA_029990105.1

Typification

Nomenclatural type of:

Genomics

Accession
NCBI Assembly:GCA_029990105.1
Cultures
Strain sc|0038743
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 1.06%
  • Quality: 94.7
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 21 amino acids
Sequencing depth
165.0 ×
Source
Other features
  • G+C Content: 62.5%
  • Coding Density: 85.44%
  • Codon Table: 11
  • N50: 91,003 bp
  • Contigs: 289
  • Largest Contig: 240,991 bp
  • Assembly Length: 9,335,704 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
contamination and completeness checks in checkM2, genome statistics and assembly coverage using QUAST, BBTOOlS,MiGA and checked tRNA elements using NCBI refseq annotation
Automated checks
Complete

Last modified 24 days ago

Sample Metadata

BioSample entries
Date
Collection Date: 2019-10-28
Location
Not detected
Toponym
Geo Loc Name: South Africa
Environment
Sample Type: culture
Other
Host: Argyrolobium robustum
Package
Not detected
All retrieved samples

Metadata retrieved 24 days ago

Sequencing Experiments

Arg237L


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