JSON

Genome sc|0002323

Name

“Zemynaea palustris”

Database

NCBI Assembly

Accession

GCA_003134695.1

Genomics

Accession
NCBI Assembly:GCA_003134695.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 97.69%
  • Contamination: 0.1%
  • Quality: 97.19
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 55.0%)
  • 0 23S rRNAs
  • tRNAs for 20 amino acids
Source
Other features
  • G+C Content: 64.33%
  • Coding Density: 92.87%
  • Codon Table: 11
  • N50: 88,284 bp
  • Contigs: 61
  • Largest Contig: 279,952 bp
  • Assembly Length: 2,695,887 bp
  • Ambiguous Assembly Fraction: 0.079%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2011-10-16
Location
Lat Lon: 68.3535 N 19.0471 E
Toponym
Geo Loc Name: Sweden: Stordalen Mire
Environment
Sample Type: metagenomic assembly
Isolation Source: permafrost active layer soil
Other
Host: not applicable
Depth: 0.26-0.29
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
All retrieved samples
Metadata retrieved 2 months ago


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