JSON

Genome sc|0000268

Name

Indicimonas acetifermentansTs

Database

NCBI Assembly

Accession

GCA_947581815.1

Genomics

Accession
NCBI Assembly:GCA_947581815.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 95.05%
  • Contamination: 4.4%
  • Quality: 73.05
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 6 amino acids
Source
Other features
  • G+C Content: 63.62%
  • Coding Density: 92.17%
  • Codon Table: 11
  • N50: 16,543 bp
  • Contigs: 179
  • Largest Contig: 115,386 bp
  • Assembly Length: 2,385,795 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
 Genome quality has been evaluated using checkM, 16S rRNA gene presence has been analysed with sortmerna and tRNAscan was used to identify tRNA 
Automated checks
Complete
Last modified 11 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2021-02
Location
Lat Lon: 37° 54′ 51″ S, 49° 16′ 59″ E
View map of sampling locations
Toponym
Geo Loc Name: Indian Ocean
Environment
Isolation Source: Deep-sea sediment
Other
Not detected
Package
Biosamplemodel: Metagenome or environmental
All retrieved samples
Metadata retrieved 11 months ago


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