JSON

Genome sc|0000268

Name

Indicimonas acetifermentansTs

Database

NCBI Assembly

Accession

GCA_947581815.1

Genomics

Accession
NCBI Assembly:GCA_947581815.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 95.05%
  • Contamination: 4.4%
  • Quality: 73.05
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 6 amino acids
Source
Other features
  • G+C Content: 63.62%
  • Coding Density: 92.17%
  • Codon Table: 11
  • N50: 16,543 bp
  • Contigs: 179
  • Largest Contig: 115,386 bp
  • Assembly Length: 2,385,795 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
 Genome quality has been evaluated using checkM, 16S rRNA gene presence has been analysed with sortmerna and tRNAscan was used to identify tRNA 
Automated checks
Complete
Last modified 4 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2021-02
Location
Lat Lon: 37° 54′ 51″ S, 49° 16′ 59″ E
View sampling location map
Toponym
Geo Loc Name: Indian Ocean
Environment
Isolation Source: Deep-sea sediment
Other
Not detected
Package
Biosamplemodel: Metagenome or environmental
All retrieved samples
Metadata retrieved 4 months ago


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