Genome sc|0000270

Typification

Nomenclatural type of:

• Methanomethylicus oleisabuli

Genomics

Accession

NCBI Assembly:GCA_001717025.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 99.1%
• Contamination: 0.9%
• Quality: 94.6

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

3.0 ×

Source

• BioSample: SAMN04994460
• BioSample: SAMN05003750

Other features

• G+C Content: 55.4%
• Coding Density: 88.26%
• Codon Table: 11
• N50: 24,139 bp
• Contigs: 86
• Largest Contig: 67,467 bp
• Assembly Length: 1,374,477 bp
• Ambiguous Assembly Fraction: 0.001%

Automated checks

Complete

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Last modified 11 days ago

Sample Metadata

BioSample entries

• BioSample: SAMN04994460
• BioSample: SAMN05003750

Date

Collection Date: 2015-01-01

Location

Lat Lon: 27° 28′ 12″ S, 153° 1′ 12″ E • 53° 55′ 48″ N, 116° 35′ 60″ W

View map of sampling locations

Toponym

Geo Loc Name: Australia: Brisbane • Canada: Alberta

Environment

Env Material: sludge

Sample Type: metagenomic assembly

Env Biome: anaerobic

Isolation Source: Iso-alkane degrading methanogenic enrichment culture from Athabasca tailings sands

Other

Not detected

Package

Not detected

All retrieved samples

• SAMN04994460: MIMS Environmental/Metagenome sample from Candidatus Methanomethylicus oleisabuli
• SAMN05003750: MIMS Environmental/Metagenome sample from aquatic metagenome

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Metadata retrieved 11 days ago