Genome sc|0000270

Genomics

Accession

NCBI Assembly:GCA_001717025.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 100.0%
• Contamination: 3.8%
• Quality: 81.0

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 20 amino acids

Source

• BioSample: SAMN04994460

Other features

• G+C Content: 55.39%
• Coding Density: 88.26%
• Codon Table: 11
• N50: 24,139 bp
• Contigs: 86
• Largest Contig: 67,467 bp
• Assembly Length: 1,374,477 bp
• Ambiguous Assembly Fraction: 0.001%

Automated checks

Complete

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Last modified about 1 month ago

Sample Metadata

BioSample entries

• BioSample: SAMN04994460

Date

Collection Date: 2015-01-01

Location

Lat Lon: 27.47 S 153.01999999 E

Toponym

Geo Loc Name: Australia: Brisbane

Environment

Env Material: sludge

Sample Type: metagenomic assembly

Env Biome: anaerobic

Isolation Source: Iso-alkane degrading methanogenic enrichment culture from Athabasca tailings sands

Other

Not detected

Package

Ncbi Submission Package: MIMS.me.wastewater.6.0

Biosamplemodel: MIGS/MIMS/MIMARKS.wastewater

All retrieved samples

• SAMN04994460: MIMS Environmental/Metagenome sample from Candidatus Methanomethylicus oleisabuli

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Metadata retrieved about 1 month ago