JSONPDF

Candidatus Methanomethylicus mesodigestus

This name was automatically created through literature mining, and it currently has no standing or validity.
Authors of original publications are encouraged to claim the name and submit it for validation
Login or Signup to claim this name.

Citation

Formal styling
“Candidatus Methanomethylicus mesodigestus” corrig. Vanwonterghem et al., 2016
Effective publication
Vanwonterghem et al., 2016
Corrigendum
Oren et al., 2020 from “Candidatus Methanomethylicus mesodigestum” (sic)
SeqCode status
Automated discovery
Canonical URL
https://seqco.de/i:23974

Nomenclature

Rank
Species
Syllabication
me.so.di.ges'tus
Etymology
Gr. masc. adj. mesos, middle; L. masc. past. part. digestus, that has a good digestion; N.L. masc. adj. mesodigestus, referring to a mesophilic digester
Nomenclatural type
NCBI Assembly: GCA_001717005.1

Taxonomy

Description
This organism is inferred to be capable of methylotrophic methanogenesis, is non-motile, and not cultivated, represented by near-complete population genomes V1 (type strain) and V2 obtained from anaerobic digesters.
Classification
Archaea » “Methanomethylicota” » Candidatus Methanomethylicia » Candidatus Methanomethylicales » Candidatus Methanomethylicaceae » Candidatus Methanomethylicus » Candidatus Methanomethylicus mesodigestus
Parent
Candidatus Methanomethylicus gtdb
Pseudonyms
  • Candidatus Methanomethylicus mesodigestum (Original, corrected name)

Genomics

Accession
NCBI Assembly:GCA_001717005.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 96.2%
  • Contamination: 0.0%
  • Quality: 96.2
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 18 amino acids
Source
Other features
  • G+C Content: 57.57%
  • Coding Density: 89.95%
  • Codon Table: 11
  • N50: 34,148 bp
  • Contigs: 88
  • Largest Contig: 122,250 bp
  • Assembly Length: 1,428,061 bp
  • Ambiguous Assembly Fraction: 1.0%
Automated checks
Complete
See additional details
Last modified 10 months ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Rodriguez-R, Luis M almost 2 years ago

Publications
2

Citation Title
Oren et al., 2020, International Journal of Systematic and Evolutionary Microbiology Lists of names of prokaryotic Candidatus taxa
Corrigendum
Vanwonterghem et al., 2016, Nature Microbiology Methylotrophic methanogenesis discovered in the archaeal phylum Verstraetearchaeota
Effective publication


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license