Genome sc|0003072

Genomics

Accession

NCBI Assembly:GCA_016464725.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 92.83%
• Contamination: 0.77%
• Quality: 88.98

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 48.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 21 amino acids

Sequencing depth

14.0 ×

Source

• BioSample: SAMN16445488
• BioSample: SAMN16703804

Other features

• G+C Content: 66.5%
• Coding Density: 89.45%
• Codon Table: 11
• N50: 148,416 bp
• Contigs: 40
• Largest Contig: 352,400 bp
• Assembly Length: 3,101,761 bp
• Ambiguous Assembly Fraction: 0.00097%

Submitter comments

Completeness estimated with CheckM2

Automated checks

Complete

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Last modified about 1 month ago

Sample Metadata

BioSample entries

• BioSample: SAMN16445488
• BioSample: SAMN16703804

Date

Collection Date: 2005

Location

Lat Lon: Not collected

Toponym

Geo Loc Name: Antarctica: Mitchell Peninsula

Environment

Sample Type: metagenomic assembly

Isolation Source: soil • Antarctic soil

Other

Not detected

Package

Ncbi Submission Package: Microbe.1.0 • Metagenome.environmental.1.0

Biosamplemodel: Microbe, viral or environmental • Metagenome or environmental

All retrieved samples

• SAMN16445488: Microbe sample from Candidatus Dormiibacterota bacterium
• SAMN16703804: Metagenome or environmental sample from Antarctic Soil

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Metadata retrieved about 1 month ago