Dormibacter inghamiae

Citation

Formal styling

Dormibacter inghamiae Montgomery et al., 2021 (valid 2024)

Effective publication

Montgomery et al., 2021

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:acset5a1 (validated)

Canonical URL

https://seqco.de/i:49053

Nomenclature

Rank

Species

Syllabication

ingh.am'i.ae

Etymology

N.L. gen. n. inghamiae, in honor of Susan Ingham, a Australian Subantarctic voyager, pioneer of subantarctic research on wildlife

Nomenclatural type

NCBI Assembly: GCA_016464725.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

Based on phylogenomic analysis of 120 concatenated single copy proteins. MSA was generated with GTDB-Tk v1.3.0 and tree was reconstructed with RaxML v8.2.12.

Classification

Bacteria » Dormibacterota » “Dormibacteria” » “Dormibacterales” » “Dormibacteraceae” » Dormibacter » Dormibacter inghamiae

Parent

Dormibacter

Genomics

Accession

NCBI Assembly:GCA_016464725.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 92.83%
• Contamination: 0.77%
• Quality: 88.98

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 48.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 21 amino acids

Sequencing depth

14.0 ×

Source

• BioSample: SAMN16445488
• BioSample: SAMN16703804

Other features

• G+C Content: 66.5%
• Coding Density: 89.45%
• Codon Table: 11
• N50: 148,416 bp
• Contigs: 40
• Largest Contig: 352,400 bp
• Assembly Length: 3,101,761 bp
• Ambiguous Assembly Fraction: 0.00097%

Submitter comments

Completeness estimated with CheckM2

Automated checks

Complete

See additional details

---

Last modified about 2 months ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_016464725.1
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Dormibacter inghamiae (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified about 2 months ago
• Submission process status
• Quality checks before valid publication

Registered by

Ferrari, Belinda, created 4 months ago

Submitted by

Ferrari, Belinda 4 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Validated by

Rodriguez-R, Luis M about 2 months ago

Date of priority

2024-10-04 01:30 AM (UTC)