Genome sc|0003073


Database

NCBI Assembly

Accession

GCA_016464775.1

Genomics

Accession
NCBI Assembly:GCA_016464775.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 93.52%
  • Contamination: 4.55%
  • Quality: 70.77
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 21 amino acids
Sequencing depth
14.0 ×
Source
Other features
  • G+C Content: 69.0%
  • Coding Density: 89.97%
  • Codon Table: 11
  • N50: 94,063 bp
  • Contigs: 76
  • Largest Contig: 259,037 bp
  • Assembly Length: 4,520,224 bp
  • Ambiguous Assembly Fraction: 0.0024%
Submitter comments
Completeness estimated with CheckM2
Automated checks
Complete

Last modified 26 days ago

Sample Metadata

BioSample entries
Date
Collection Date: 2005
Location
Lat Lon: Not collected
Toponym
Geo Loc Name: Antarctica: Mitchell Peninsula
Environment
Sample Type: metagenomic assembly
Isolation Source: soil • Antarctic soil
Other
Not detected
Package
Ncbi Submission Package: Microbe.1.0Metagenome.environmental.1.0
Biosamplemodel: Microbe, viral or environmental • Metagenome or environmental
All retrieved samples

Metadata retrieved 26 days ago


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license