Genome sc|0003094


Database

NCBI Assembly

Accession

GCA_014304875.1

Genomics

Accession
NCBI Assembly:GCA_014304875.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 92.87%
  • Contamination: 0.41%
  • Quality: 90.82
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 20 amino acids
Sequencing depth
7.3 ×
Source
Other features
  • G+C Content: 62.0%
  • Coding Density: 90.58%
  • Codon Table: 11
  • N50: 16,810 bp
  • Contigs: 211
  • Largest Contig: 38,315 bp
  • Assembly Length: 2,485,499 bp
  • Ambiguous Assembly Fraction: 0.006%
Automated checks
Complete

Last modified about 1 month ago

Sample Metadata

BioSample entries
Date
Collection Date: 2018
Location
Lat Lon: 66.20 S 110.32 E
Toponym
Geo Loc Name: Antarctica
Environment
Sample Type: metagenomic assembly
Isolation Source: Antarctica soil
Env Broad Scale: soil [ENVO:00001998]
Env Local Scale: pingo [ENVO:00000413]
Env Medium: soil [ENVO:00001998]
Other
Depth: 0
Package
Ncbi Submission Package: MIMAG.soil.6.0Metagenome.environmental.1.0
Biosamplemodel: MIMAG.soil • Metagenome or environmental
All retrieved samples

Metadata retrieved about 1 month ago

Sequencing Experiments

MAG


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license