JSON

Genome sc|0003508 Ts

Name

Agrobacterium fabrum

Database

NCBI Assembly

Accession

GCF_000092025.1

Typification

Nomenclatural type of:

Genomics

Accession
NCBI Assembly: GCF_000092025.1 [NCBI]
Cultures
Strain sc|0040502 Pt
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 99.1%
  • Contamination: 0.9%
  • Quality: 94.6
Ribosomal and transfer RNA genes
  • 4 16S rRNAs (up to 100.0%)
  • 3 23S rRNAs (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
49.0 ×
Source
Other features
  • G+C Content: 59.0%
  • Coding Density: 87.69%
  • Codon Table: 11
  • N50: 2,841,580 bp
  • Contigs: 4
  • Largest Contig: 2,841,580 bp
  • Assembly Length: 5,674,258 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
Last modified 10 months ago

Sample Metadata

BioSample entries
Date
Not detected
Location
Not detected
Toponym
Not detected
Environment
Not detected
Other
Not detected
Package
Ncbi Submission Package: Generic.1.0
Biosamplemodel: Generic
All retrieved samples
Metadata retrieved over 1 year ago


© 2022-2026 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license
seqco.de/r:a5syfcw5