JSON

Genome sc|0003510

Name

“Ciceribacter ferrooxidans”

Database

NCBI Assembly

Accession

GCF_004137355.1

Genomics

Accession
NCBI Assembly:GCF_004137355.1
Cultures
Strain sc|0038875
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 98.1%
  • Contamination: 2.8%
  • Quality: 84.1
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
168.0 ×
Source
Other features
  • G+C Content: 63.3%
  • Coding Density: 88.19%
  • Codon Table: 11
  • N50: 438,430 bp
  • Contigs: 427
  • Largest Contig: 905,764 bp
  • Assembly Length: 5,094,448 bp
  • Ambiguous Assembly Fraction: 0.0022%
Automated checks
Complete
Last modified 12 days ago

Sample Metadata

BioSample entries
Date
Collection Date: 2016-03
Location
Not detected
Toponym
Geo Loc Name: China: Ronggui, Shunde, Guangdong
Environment
Sample Type: waterway sediment
Isolation Source: waterway sediment
Other
Not detected
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
All retrieved samples
Metadata retrieved 14 days ago


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