Genome sc|0003528

Genomics

Accession

NCBI Assembly:GCF_003403035.1

Cultures

Strain sc|0038892

Type

Isolate Genome

Estimated Quality Metrics

• Completeness: 99.1%
• Contamination: 1.9%
• Quality: 89.6

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

19.0 ×

Source

• BioSample: SAMN09789026

Other features

• G+C Content: 58.4%
• Coding Density: 90.74%
• Codon Table: 11
• N50: 248,341 bp
• Contigs: 45
• Largest Contig: 534,275 bp
• Assembly Length: 4,375,801 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

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Last modified 19 days ago

Sample Metadata

BioSample entries

• BioSample: SAMN09789026

Date

Collection Date: 2017-07-10

Location

Lat Lon: 37° 19′ 12″ N, 127° 7′ 12″ E

View sampling location map

Toponym

Geo Loc Name: South Korea: Hanam-si

Environment

Env Material: sludge

Env Biome: Wastewater treatment center

Isolation Source: sludge from wastewater treatment center

Other

Isol Growth Condt: R2A 30 degree C

Package

Ncbi Submission Package: MIGS.ba.wastewater.5.0

Biosamplemodel: MIGS/MIMS/MIMARKS.wastewater

All retrieved samples

• SAMN09789026: MIGS Cultured Bacterial/Archaeal sample from Mesorhizobium sp. LA-28

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Metadata retrieved 19 days ago