JSON

Genome sc|0003530

Name

“Pararhizobium mangrovi”

Database

NCBI Assembly

Accession

GCF_006516965.1

Genomics

Accession
NCBI Assembly:GCF_006516965.1
Cultures
Strain sc|0038894
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 98.1%
  • Contamination: 0.9%
  • Quality: 93.6
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
67.0 ×
Source
Other features
  • G+C Content: 64.7%
  • Coding Density: 88.87%
  • Codon Table: 11
  • N50: 103,709 bp
  • Contigs: 70
  • Largest Contig: 366,854 bp
  • Assembly Length: 3,926,315 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
Last modified 8 days ago

Sample Metadata

BioSample entries
Date
Collection Date: 2017-07-25
Location
Not detected
Toponym
Geo Loc Name: China: Guangxi
Environment
Sample Type: cell culture
Isolation Source: stem
Other
Host: Aegiceras corniculatum
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
All retrieved samples
Metadata retrieved 8 days ago


© 2022-2025 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license