Genome sc|0003680

Genomics

Accession

NCBI Assembly:GCA_008364845.1

Cultures

Strain sc|0040321

Type

Isolate Genome

Estimated Quality Metrics

• Completeness: 100.0%
• Contamination: 0.0%
• Quality: 100.0

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

197.0 ×

Source

• SRA: SRX13217944
• SRA: SRX6825136

Other features

• G+C Content: 73.45%
• Coding Density: 90.7%
• Codon Table: 11
• N50: 335,339 bp
• Contigs: 28
• Largest Contig: 684,601 bp
• Assembly Length: 4,027,363 bp
• Ambiguous Assembly Fraction: 0.0048%

Automated checks

Complete

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Last modified 3 months ago

Sample Metadata

BioSample entries

• BioSample: SAMN12662246

Date

Collection Date: 2016-06

Location

Not detected

Toponym

Geo Loc Name: Russia: Tatarstan, Nurlat Region, the Cheremukhovskoe oilfield

Environment

Sample Type: pure culture

Isolation Source: injection water

Other

Not detected

Package

Ncbi Submission Package: Microbe.1.0

Biosamplemodel: Microbe, viral or environmental

All retrieved samples

• SAMN12662246: Microbe sample from Actinotalea subterranea

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Metadata retrieved 4 months ago