Genome sc|0000381

Genomics

Accession

NCBI Assembly:GCA_029946125.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 99.47%
• Contamination: 2.04%
• Quality: 89.27

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

521.0 ×

Source

• SRA: SRR23006905

Other features

• G+C Content: 47.71%
• Coding Density: 87.63%
• Codon Table: 11
• N50: 51,691 bp
• Contigs: 146
• Largest Contig: 155,944 bp
• Assembly Length: 3,510,200 bp
• Ambiguous Assembly Fraction: 0.0054%

Automated checks

Complete

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Last modified 2 months ago

Sample Metadata

BioSample entries

• BioSample: SRS16385543

Date

Collection Date: 2020

Location

Lat Lon: 62.1770 S 58.9211 W

Toponym

Geo Loc Name: Antarctica

Environment

Isolation Source: Lake sediment enrichment

Other

Not detected

Package

Ncbi Submission Package: Metagenome.environmental.1.0

Biosamplemodel: Metagenome or environmental

All retrieved samples

• SRS16385543: D1-2020

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Metadata retrieved 2 months ago