Genome sc|0000381


Database

NCBI Assembly

Accession

GCA_029946125.1

Genomics

Accession
NCBI Assembly:GCA_029946125.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 99.47%
  • Contamination: 2.04%
  • Quality: 89.27
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
521.0 ×
Source
Other features
  • G+C Content: 47.71%
  • Coding Density: 87.63%
  • Codon Table: 11
  • N50: 51,691 bp
  • Contigs: 146
  • Largest Contig: 155,944 bp
  • Assembly Length: 3,510,200 bp
  • Ambiguous Assembly Fraction: 0.0054%
Automated checks
Complete

Last modified 21 days ago

Sample Metadata

BioSample entries
Date
Collection Date: 2020
Location
Lat Lon: 62.1770 S 58.9211 W
Toponym
Geo Loc Name: Antarctica
Environment
Isolation Source: Lake sediment enrichment
Other
Not detected
Package
Ncbi Submission Package: Metagenome.environmental.1.0
Biosamplemodel: Metagenome or environmental
All retrieved samples

Metadata retrieved 21 days ago

Sequencing Experiments

SRR23006905


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