JSON

Genome sc|0003908

Name

Methylotuvimicrobium crucis

Database

NCBI Assembly

Accession

GCA_050611825.1

Genomics

Accession
NCBI Assembly:GCA_050611825.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 99.25%
  • Contamination: 2.5%
  • Quality: 86.75
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 20 amino acids
Sequencing depth
20.0 ×
Source
Other features
  • G+C Content: 48.2%
  • Coding Density: 83.26%
  • Codon Table: 11
  • N50: 77,223 bp
  • Contigs: 100
  • Largest Contig: 326,106 bp
  • Assembly Length: 5,027,165 bp
  • Ambiguous Assembly Fraction: 0.016%
Automated checks
Complete
Last modified about 2 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2019-11-05
Location
Lat Lon: 24° 55′ 56″ S, 44° 28′ 27″ W
View map of sampling locations
Toponym
Geo Loc Name: Brazil:Santos Basin
Environment
Env Broad Scale: marine sediment
Env Local Scale: Deep-sea
Env Medium: deep-sea sediment
Other
Depth: 500
Package
Biosamplemodel: MIMS.me; MIGS/MIMS/MIMARKS.sediment
All retrieved samples
Metadata retrieved about 2 months ago


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