Genome sc|0004081 Ts


Database

NCBI Assembly

Accession

GCA_965267825.1

Typification

Nomenclatural type of:

Genomics

Accession
NCBI Assembly: GCA_965267825.1 [NCBI | EMBL]
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 0.0%
  • Quality: 100.0
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
1000.0 ×
Source
Other features
  • G+C Content: 48.0%
  • Coding Density: 94.98%
  • Codon Table: 11
  • N50: 1,384,434 bp
  • Contigs: 1
  • Largest Contig: 1,384,434 bp
  • Assembly Length: 1,384,434 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
See full comment
Automated checks
Complete

Last modified about 1 month ago

Sample Metadata

BioSample entries
Date
Collection Date: 2021-07-19
Location
Geographic Location Latitude: 48° 50′ 55″ N
Geographic Location Longitude: 14° 29′ 27″ E
View map of sampling locations
Toponym
Geographic Location Country And Or Sea: Czech Republic
Environment
Broad Scale Environmental Context: aquatic
Local Environmental Context: Rimov
Environmental Medium: water
Other
Depth: 0.5
Package
Ena Checklist: ERC000024
All retrieved samples

Metadata retrieved about 1 month ago

Sequencing Experiments

Illumina NovaSeq 6000 paired end sequencing


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