SeqCode Registry
cognitis nomina
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Genomes
sc|0000450
JSON
Genome sc|0000450
Name
Methylomirabilis oxygeniifera
Ts
Database
NCBI Assembly
Accession
GCA_000091165.1
Genomics
Accession
NCBI Assembly:
GCA_000091165.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
96.26%
Contamination:
2.59%
Quality:
83.31
Ribosomal and transfer RNA genes
1 16S rRNA (up to 100.0%)
1 23S rRNA (up to 100.0%)
tRNAs for 19 amino acids
Source
BioSample: SAMEA3138294
Other features
G+C Content:
58.58%
Coding Density:
88.15%
Codon Table:
11
N50:
2,752,854 bp
Contigs:
1
Largest Contig:
2,752,854 bp
Assembly Length:
2,752,854 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
Sample Metadata
Date
Collection Date:
06-Jul-06
Location
Lat Lon:
52.17 N 6.41 E
Toponym
Not detected
Environment
Not detected
Other
Not detected
Package
Ena Checklist:
ERC000011
All retrieved samples
SAMEA3138294
: BioSample entry for genome collection GCA_000091165
Metadata retrieved
8 months ago
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
SAMEA3138294
×
ENA-CHECKLIST
ERC000011
note
Y
lat lon
52.17 N 6.41 E
organism
Candidatus Methylomirabilis oxyfera
collection date
06-Jul-06
ENA-FIRST-PUBLIC
2014-11-20
ENA-LAST-UPDATE
2016-10-21
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