Genome sc|0000452


Database

NCBI Assembly

Accession

GCA_002117145.1

Genomics

Accession
NCBI Assembly:GCA_002117145.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 96.55%
  • Contamination: 0.2%
  • Quality: 95.55
Ribosomal and transfer RNA genes
  • 2 16S rRNAs (up to 100.0%)
  • 2 23S rRNAs (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
1700.0 ×
Source
Other features
  • G+C Content: 39.72%
  • Coding Density: 90.38%
  • Codon Table: 11
  • N50: 1,838,212 bp
  • Contigs: 1
  • Largest Contig: 1,838,212 bp
  • Assembly Length: 1,838,212 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
checkM2
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2011-03-01
Location
Lat Lon: 53.5653 N 10.0014 E
Toponym
Geo Loc Name: Germany: Hamburg
Environment
Env Material: wastewater
Env Biome: wastewater
Other
Host: Hartmannella sp. FS5
Package
Ncbi Submission Package: MIGS.ba.host-associated.5.0
Biosamplemodel: MIGS/MIMS/MIMARKS.host-associated
All retrieved samples

Metadata retrieved 5 months ago


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