Genome sc|0000453


Database

NCBI Assembly

Accession

GCA_001899315.1

Genomics

Accession
NCBI Assembly:GCA_001899315.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 97.44%
  • Contamination: 2.28%
  • Quality: 86.04
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Sequencing depth
20.0 ×
Source
Other features
  • G+C Content: 49.42%
  • Coding Density: 89.53%
  • Codon Table: 11
  • N50: 3,231,268 bp
  • Contigs: 8
  • Largest Contig: 3,231,268 bp
  • Assembly Length: 5,494,645 bp
  • Ambiguous Assembly Fraction: 0.53%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2011-02-16
Location
Lat Lon: 27.4954 S 153.01199999 E
Toponym
Geo Loc Name: Australia: Brisbane
Environment
Sample Type: metagenomic assembly
Isolation Source: Activated sludge was sampled from two, 4-l enhanced biological phosphorus removal (EBPR) sequencing batch reactors seeded from Thornside Wastewater Treatment Plant, Queensland
Other
Not detected
Package
Ncbi Submission Package: Metagenome.environmental.1.0
Biosamplemodel: Metagenome or environmental
All retrieved samples

Metadata retrieved 5 months ago


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license