Genome sc|0000462

Name

Methanoliparum thermophilum^Ts

Database

NCBI Assembly

Accession

GCA_004212075.1

Genomics

Accession

NCBI Assembly:GCA_004212075.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

Completeness: 92.5%
Contamination: 1.3%
Quality: 86.0

Ribosomal and transfer RNA genes

1 16S rRNA (up to 100.0%)
1 23S rRNA (up to 100.0%)
tRNAs for 20 amino acids

Sequencing depth

11.0 ×

Source

Other features

G+C Content: 35.7%
Coding Density: 89.41%
Codon Table: 11
N50: 192,136 bp
Contigs: 12
Largest Contig: 319,195 bp
Assembly Length: 1,257,141 bp
Ambiguous Assembly Fraction: 0.0%

Submitter comments

Coverage was evaluated with Bowtie2. Completness and contamination were assessed with CheckM (v1).

Automated checks

Complete

Last modified 4 days ago

Sample Metadata

BioSample entries

Date

Collection Date: 2015-12-08

Location

Lat Lon: 22.797 S 47.113 W

Toponym

Geo Loc Name: Brazil

Environment

Sample Type: metagenomic assembly

Isolation Source: Enrichment culture (50C) from petroleum sample

Other

Host: Not relevant

Temp: 50

Package

Ncbi Submission Package: Microbe.1.0 • Metagenome.environmental.1.0

Biosamplemodel: Microbe, viral or environmental • Metagenome or environmental

All retrieved samples

Metadata retrieved 4 days ago

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