JSON

Genome sc|0000500

Name

Rhodopirellula halodulae

Database

NCBI Assembly

Accession

GCF_020966775.1

Genomics

Accession
NCBI Assembly:GCF_020966775.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 94.3%
  • Contamination: 1.9%
  • Quality: 84.8
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
100.0 ×
Source
Other features
  • G+C Content: 56.24%
  • Coding Density: 88.78%
  • Codon Table: 11
  • N50: 663,819 bp
  • Contigs: 33
  • Largest Contig: 2,516,066 bp
  • Assembly Length: 6,608,739 bp
  • Ambiguous Assembly Fraction: 0.018%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2019-12-26
Location
Not detected
Toponym
Geo Loc Name: India:Mandapam
Environment
Sample Type: cell culture
Isolation Source: Seaweed
Other
Not detected
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
All retrieved samples
Metadata retrieved 4 months ago


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