Genome sc|0005381


Database

NCBI Assembly

Accession

GCF_000299415.1

Genomics

Accession
NCBI Assembly:GCF_000299415.1
Type
Enrichment Genome
Estimated Quality Metrics
  • Completeness: 94.85%
  • Contamination: 0.85%
  • Quality: 90.6
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Sequencing depth
165.0 ×
Source
Other features
  • G+C Content: 66.39%
  • Coding Density: 90.71%
  • Codon Table: 11
  • N50: 1,069,192 bp
  • Contigs: 13
  • Largest Contig: 1,700,236 bp
  • Assembly Length: 4,202,850 bp
  • Ambiguous Assembly Fraction: 7.1e-05%
Submitter comments
The quality metrics are based on GDBT database. 
Automated checks
Complete

Last modified 2 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2005
Location
Lat Lon: Not parsed: , Not parsed:
View map of sampling locations
Toponym
Geo Loc Name: Netherlands
Environment
Not detected
Other
Isol Growth Condt: 16913916
Package
Ncbi Submission Package: MIGS.ba.wastewater.5.0
Biosamplemodel: MIGS/MIMS/MIMARKS.wastewater
All retrieved samples

Metadata retrieved 2 months ago

Sequencing Experiments

Candidatus Microthrix parvicella genome sequencing - Mated Pairs library
Candidatus Microthrix parvicella genome sequencing - Paired End library


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