Genome sc|0005390

Genomics

Accession

NCBI Assembly:GCA_004195045.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 97.2%
• Contamination: 0.9%
• Quality: 92.7

Ribosomal and transfer RNA genes

• 2 16S rRNAs (up to 100.0%)
• 2 23S rRNAs (up to 100.0%)
• tRNAs for 21 amino acids

Sequencing depth

975.0 ×

Source

• BioSample: SAMN10849877

Other features

• G+C Content: 32.69%
• Coding Density: 83.9%
• Codon Table: 11
• N50: 501,434 bp
• Contigs: 5
• Largest Contig: 906,177 bp
• Assembly Length: 2,217,123 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

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Last modified about 1 month ago

Sample Metadata

BioSample entries

• BioSample: SAMN10849877

Date

Collection Date: 2016-07/2017-08

Location

Lat Lon: 23° 3′ N, 113° 10′ 12″ E

View map of sampling locations

Toponym

Geo Loc Name: China:Sun Yat-sen University,Guangzhou

Environment

Sample Type: metagenomic assembly

Isolation Source: acid mine drainage

Other

Not detected

Package

Not detected

All retrieved samples

• SAMN10849877: Microbe sample from Candidatus Acididesulfobacter guangdongensis AP2

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Metadata retrieved about 1 month ago