Genome sc|0006260 ^Ts

Typification

Nomenclatural type of:

• Nitrosarchaeum limnae

Genomics

Accession

NCBI Assembly: GCA_000204585.1 [NCBI | EMBL]

Cultures

Strain sc|0042120

Type

Single-Cell Amplified Genome (SAG)

Estimated Quality Metrics

• Completeness: 100.0%
• Contamination: 3.8%
• Quality: 81.0

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 19 amino acids

Source

• BioSample: SAMN02471010

Other features

• G+C Content: 31.92%
• Coding Density: 89.01%
• Codon Table: 11
• N50: 1,772,718 bp
• Contigs: 1
• Largest Contig: 1,772,718 bp
• Assembly Length: 1,772,718 bp
• Ambiguous Assembly Fraction: 1.66%

Automated checks

Complete

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Last modified 2 days ago

Sample Metadata

BioSample entries

• BioSample: SAMN02471010

Date

Not detected

Location

Not detected

Toponym

Not detected

Environment

Not detected

Other

Not detected

Package

Not detected

All retrieved samples

• SAMN02471010: Sample from Candidatus Nitrosarchaeum limnium SFB1

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Metadata retrieved 2 days ago