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Nitrosarchaeum limnae

Citation

Formal styling
Nitrosarchaeum limnae corrig. Blainey et al., 2011 (priority 2026)
Effective publication
Blainey et al., 2011
Corrigendum
Oren, 2017 from “Nitrosoarchaeum limnia” (sic)
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:ohc2xrma (validated)
Canonical URL
https://seqco.de/i:148

Nomenclature

Rank
Species
Syllabication
lim'nae
Etymology
Gr. fem. n. limne, freshwater; N.L. gen. fem. n. limnae, of freshwater
Tags
econym feminine geographic
Nomenclatural type
Genome sc|0006260 Ts
Reference strain
Strain sc|0042120: SFB1 Lookup StrainInfo
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Blainey et al., 2011: a mesophilic, chemolithoautotrophic ammonia-oxidizing archaeon belonging to the Thaumarchaeota phylum
Classification
Archaea » Thermoproteota » Nitrososphaeria » Nitrosopumilales » Nitrosopumilaceae » Nitrosarchaeum » Nitrosarchaeum limnae
Parent
Nitrosarchaeum
Pseudonyms
  • Nitrosoarchaeum limnia (Original, corrected name)

Genomics

Accession
NCBI Assembly: GCA_000204585.1 [NCBI | EMBL]
Cultures
Strain sc|0042120
Type
Single-Cell Amplified Genome (SAG)
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 3.8%
  • Quality: 81.0
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Source
Other features
  • G+C Content: 31.92%
  • Coding Density: 89.01%
  • Codon Table: 11
  • N50: 1,772,718 bp
  • Contigs: 1
  • Largest Contig: 1,772,718 bp
  • Assembly Length: 1,772,718 bp
  • Ambiguous Assembly Fraction: 1.66%
Automated checks
Complete
See additional details
Last modified 22 days ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
Over 7 years ago and claimed 3 months ago by Rasmussen, Ejnar
Submitted
About 1 month ago by Rasmussen, Ejnar
Curators
Validated
21 days ago by St. John, Emily
Date of priority
2026-10-01 08:29 AM (UTC)

Publications
4

Citation Title
Oren et al., 2020, International Journal of Systematic and Evolutionary Microbiology Lists of names of prokaryotic Candidatus taxa
Oren, 2017, International Journal of Systematic and Evolutionary Microbiology A plea for linguistic accuracy – also for Candidatus taxa
Corrigendum
Mosier et al., 2012, Journal of Bacteriology Genome Sequence of “ Candidatus Nitrosoarchaeum limnia” BG20, a Low-Salinity Ammonia-Oxidizing Archaeon from the San Francisco Bay Estuary
Blainey et al., 2011, PLoS ONE Genome of a Low-Salinity Ammonia-Oxidizing Archaeon Determined by Single-Cell and Metagenomic Analysis
Effective publication


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seqco.de/r:ohc2xrma